Although renal failure is one of the complications of PKD, with a creatinine of 1.1, this is unlikely. You are correct that failing kidneys often lead to an increase in phosphorus, but with a normal creatinine level, this would be an unlikely case.
In the case of the anemia, there are plenty of reasons why this can happen outside of the kidneys. Chronic disease itself can lead to anemia. I would suggest further workup including the colonoscopy (as you ar doing). The MCV (i.e. size of the red cell) would also be indicative. A low MCV points to thalassemia or iron deficiency, a high MCV points to B12 deficiency or alcohol use. A normal MCV suggests blood loss or chronic disease.
If all the tests are not revealing, you may want to consider a hematology referral for further evaluation.
Followup with your personal physician is essential.
This answer is not intended as and does not substitute for medical advice - the information presented is for patient education only. Please see your personal physician for further evaluation of your individual case.
Thanks,
Kevin, M.D.