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Hormones generally affect the characteristics of the genitalia. Men have both estrogen and androgens, with the latter being the more dominant. Alcohol can damage the liver and a damaged liver would favor increasing estrogen levels, and hence can theoretically cause underdevelopment.
Such a scenario however is unlikely without other problems due to a diseased liver. Hence, while it is within the range of the possible, it is improbable.
Discuss your problem with your doctor, there may be problems with other hormones in which a search for answers may raise different organs (like the pituitary gland, the adrenal gland, and the gonads).