There could be a number of reasons this is happening from some retained ovarian tissue to vaginitis, bladder infection, etc. Don't want to alarm you but could also be a pre-cancer or cancer. Could be an infection to the stump that was left......... Were any cultures done? UTI's can sometimes need more then one course of antibiotics.
I know of a 10-year old Dobie that had these symptoms
What's the most common reason that can cause bloody discharge from my dogs vagina 1 month after being spayed? She seems normal. No swelling or anything but is discharging blood clots.
Don't forget we have a vet here at Med Help too! Click on the Ask a Vet forum to post your question to Dr. Cheng. :-)
I'd imagine the next step would be a consult with someone who has imaging available, or who has advanced knowledge in the field.
You don't say where you are located. Are you in the US? If so, there should be vets within reach who can investigate this furthur.